Biology & genomics MCP servers

A server here biology, genes, proteins or DNA analysis.

Not here: medicine for patients.

223servers
145 remote78 localTagged by Odel's AI, which can make mistakes
By GitHub stars, at most two per publisher
  1. Number 1: VirtualFlyBrain@virtualflybrain/vfb3-mcpMCP server for Drosophila neuroscience data from VirtualFlyBrain2% chance this is malicious. Assessed by AI, which can make mistakes.A remote server; no sign-in.9 GitHub stars.
  2. Number 2: STRING Database MCP Server@string-db/string-mcpQuery STRING interactions, enrichment, annotations, homology, and PPI networks.2% chance this is malicious. Assessed by AI, which can make mistakes.A remote server; no sign-in.7 GitHub stars.
  3. Number 3: GeneFoundry@berntpopp/genefoundryMCP gateway federating 22 biomedical MCP servers behind one endpoint: gnomAD, ClinVar, HPO, VEP.4% chance this is malicious. Assessed by AI, which can make mistakes.A remote server; you sign in with your account.6 GitHub stars.

Best fit

198 made for this, ranked by starsRemoteLocal
  1. biorxiv-mcp-server @cyanheads/biorxiv-mcp-serverSearch and retrieve bioRxiv and medRxiv preprints — by DOI, date interval, or keyword — via MCP.2% chance this is malicious. Assessed by AI, which can make mistakes.A remote server; no sign-in.4 GitHub stars.
  2. brapi-mcp-server @cyanheads/brapi-mcp-serverCollaborative BrAPI v2.1 MCP workspace — studies, germplasm, genotypes across Breedbase, T3, more.3% chance this is malicious. Assessed by AI, which can make mistakes.A remote server; no sign-in.4 GitHub stars.
  3. Elnora MCP Server @elnora-ai/elnora-mcp-serverAI-powered bioprotocol optimization — generate, search, and manage lab protocols via MCP7% chance this is malicious. Assessed by AI, which can make mistakes.A remote server; you sign in with your account.3 GitHub stars.
  4. Amass @amass/amassLinked life-science search: 43M+ papers, 1.2M+ trials, drugs, genes, FDA/EMA approvals, patents.7% chance this is malicious. Assessed by AI, which can make mistakes.A remote server; you sign in with your account.1 GitHub stars.
  5. Folklore Clinical Variant Interpretation MCP @helena-bioinformatics/folkloreBioinformatics MCP for genomic variant interpretation, gene-disease evidence and literature.3% chance this is malicious. Assessed by AI, which can make mistakes.A remote server; no sign-in.1 GitHub stars.
  6. Alphafold @pipeworx-io/alphafoldAlphaFold DB MCP — predicted protein structures.6% chance this is malicious. Assessed by AI, which can make mistakes.A remote server; no sign-in.1 GitHub stars.
  7. Emdb @pipeworx-io/emdbEMDB (EBI Electron Microscopy Data Bank) MCP — keyless.7% chance this is malicious. Assessed by AI, which can make mistakes.A remote server; no sign-in.1 GitHub stars.
  8. NobleBlocks paper search @nobleblocks/nobleblocks-mcpSearch 340M+ academic papers — citation graphs, semantic similarity, and AI literature reviews.4% chance this is malicious. Assessed by AI, which can make mistakes.A remote server; no sign-in.1 GitHub stars.
  9. BioAI 日知 @minsyang/bioai-rizhiRead-only AI biopharma news, research records, companies, and source status from BioAI 日知.4% chance this is malicious. Assessed by AI, which can make mistakes.A remote server; no sign-in.
  10. Oliver's mTOR Atlas @open-mtor-atlas/mtor-atlasEvidence-labelled mTOR research: studies, entities, pathway claims, contradictions, open questions.Not assessed yet.A remote server; no sign-in.
  11. HLA-Verify @hlaverify/hla-verifyHLA nomenclature and match checks against a pinned IPD-IMGT/HLA release. No patient identifiers.3% chance this is malicious. Assessed by AI, which can make mistakes.A remote server; no sign-in.
  12. Noodle Biomedical Literature Discovery MCP @helena-bioinformatics/noodleSearch biomedical papers, inspect publication records, and traverse citation or semantic graphs.3% chance this is malicious. Assessed by AI, which can make mistakes.A remote server; no sign-in.
  13. Biolab MCP Server @srikarjy/biolab-mcp-serverAuditable MCP server for PubMed, Europe PMC, ClinicalTrials.gov, and bioRxiv/medRxiv queries6% chance this is malicious. Assessed by AI, which can make mistakes.A remote server; no sign-in.
  14. CAN IMMUNE @sanjaysgk/can-immuneQuery CAN-IMMUNE: cancer neoantigen mutations, peptides, cell lines, MHC-I binding. Read-only.2% chance this is malicious. Assessed by AI, which can make mistakes.A remote server; no sign-in.
  15. Zetesis Scientific Due Diligence @reutavidan/zetesisDue diligence on life-science claims: omics, trials, gene therapy. Dimension by dimension.3% chance this is malicious. Assessed by AI, which can make mistakes.A remote server; no sign-in.
  16. Sniff @sniff/sniff-mcpCanine genomics for agents: breed allele frequencies, AI pathogenicity + OMIA clinical disease layer8% chance this is malicious. Assessed by AI, which can make mistakes.A remote server; no sign-in.
  17. Scispot MCP @scispot/mcpTurn any LLM into your lab assistant: search samples, track experiments, analyze data with AI.8% chance this is malicious. Assessed by AI, which can make mistakes.A remote server; you sign in with your account.
  18. Raras @rarasai/rarasDisease Twin — Brazil's rare-disease knowledge graph (10,468) over MCP. Source-grounded, PT-BR.5% chance this is malicious. Assessed by AI, which can make mistakes.A remote server; it needs your API key.
  19. Cure Cancer With AI @hifarrer/cure-cancer-with-aiFree oncology data (research, trials, FDA approvals, news) plus IBM MAMMAL biomedical predictions.6% chance this is malicious. Assessed by AI, which can make mistakes.A remote server; no sign-in.
  20. RBAi Scholar @insightwithhari/rbai-scholarSearch 11 million biomedical abstracts (PubMed, bioRxiv, medRxiv) by meaning or by exact terms.11% chance this is malicious. Assessed by AI, which can make mistakes.A remote server; it needs your API key.
  21. ProteinIQ @proteiniq/proteiniqRun protein folding, docking, design and sequence analysis tools, and read their results.Not assessed yet.A remote server; you sign in with your account.

Also touches on Biology & genomics

15 where it is one part of a bigger job