- ClaudeR - RStudio MCP Server @imnmv/clauderConnect RStudio to AI assistants for interactive R coding and data analysis.5% chance this is malicious. Assessed by AI, which can make mistakes.Runs on your machine, installed from PyPI.350 GitHub stars.
- Stata @sepinetam/stata-mcpLet LLM help you achieve your regression analysis with Stata6% chance this is malicious. Assessed by AI, which can make mistakes.Runs on your machine, installed from PyPI.263 GitHub stars.
- Jacobian @morluto/jacobianExecutable mathematics and independent verification for AI agents.5% chance this is malicious. Assessed by AI, which can make mistakes.Runs on your machine, installed from npm.241 GitHub stars.
- ITASCA MCP Server @yusong652/itasca-mcpGive AI agents full access to ITASCA PFC, FLAC3D, 3DEC, MPoint, MassFlow: docs, simulation, plots.7% chance this is malicious. Assessed by AI, which can make mistakes.Runs on your machine, installed from PyPI.210 GitHub stars.
- PFC - ITASCA Discrete Element Simulation @yusong652/pfcGive AI agents full access to ITASCA PFC - documentation, simulation, and plot capture.Not assessed yet.Runs on your machine, installed from PyPI.203 GitHub stars.
- tsbootstrap @astrogilda/tsbootstrapRead-only time-series bootstrap server: diagnose a series and compute confidence intervals.2% chance this is malicious. Assessed by AI, which can make mistakes.Runs on your machine, installed from PyPI.95 GitHub stars.
- Isaacsim @whats2000/isaacsim-mcp-serverControl NVIDIA Isaac Sim robotics simulator through MCP with 42 tools5% chance this is malicious. Assessed by AI, which can make mistakes.Runs on your machine, installed from PyPI.66 GitHub stars.
- OpenSTAAD MCP Server @bentleysystems/openstaad-mcpMCP server for Bentley STAAD.Pro via the OpenSTAAD API3% chance this is malicious. Assessed by AI, which can make mistakes.Runs on your machine, installed from MCPB.49 GitHub stars.
- ChatSpatial @cafferychen777/chatspatialSchema-enforced spatial transcriptomics analysis with 20 tools and 65 methods via MCP4% chance this is malicious. Assessed by AI, which can make mistakes.Runs on your machine, installed from PyPI.44 GitHub stars.
- Qiskit Gym MCP Server @qiskit/qiskit-gym-mcp-serverMCP server for qiskit-gym reinforcement learning quantum circuit synthesis3% chance this is malicious. Assessed by AI, which can make mistakes.Runs on your machine, installed from PyPI.40 GitHub stars.
- Qiskit Code Assistant MCP Server @qiskit/qiskit-code-assistant-mcp-serverMCP server for the Qiskit Code Assistant intelligent code completion4% chance this is malicious. Assessed by AI, which can make mistakes.Runs on your machine, installed from PyPI.40 GitHub stars.
- Galaxy @galaxyproject/galaxy-mcpMCP server for Galaxy bioinformatics platform - connect, execute tools, and manage workflows3% chance this is malicious. Assessed by AI, which can make mistakes.Runs on your machine, installed from PyPI.39 GitHub stars.
- CLIO Darshan @iowarp/darshan-mcpDarshan I/O profiler MCP server for analyzing I/O trace files4% chance this is malicious. Assessed by AI, which can make mistakes.Runs on your machine, installed from PyPI.28 GitHub stars.
- CLIO Adios @iowarp/adios-mcpFetch and analyze BP5 data files using ADIOS2. Access scientific data, metadata, and attributes...4% chance this is malicious. Assessed by AI, which can make mistakes.Runs on your machine, installed from PyPI.28 GitHub stars.
- NetLogo MCP @razee4315/netlogo-mcpCreate, run, and analyze NetLogo agent-based models through natural conversation4% chance this is malicious. Assessed by AI, which can make mistakes.Runs on your machine, installed from PyPI.27 GitHub stars.
- Blender Optics Simulator @emircbngl/blender-optics-simulatorBuild, align & render a real optical bench in Blender; drivable by an AI agent over MCP.4% chance this is malicious. Assessed by AI, which can make mistakes.Runs on your machine, installed from PyPI.24 GitHub stars.
- Jaxonomy — hybrid dynamical systems on JAX @machinavitalis/jaxonomyBuild, simulate and calibrate JAX block-diagram models of hybrid dynamical systems.3% chance this is malicious. Assessed by AI, which can make mistakes.Runs on your machine, installed from PyPI.20 GitHub stars.
- BioMASS ODE Model Builder @marcorusc/biomassConstruct, inspect, visualize, and simulate evidence-backed ODE models with BioMASSNot assessed yet.Runs on your machine, installed from PyPI.19 GitHub stars.
- Multisim MCP @yxy050208/multisim-mcpGenerate Multisim circuits, run simulations, export data, and create experiment reports.5% chance this is malicious. Assessed by AI, which can make mistakes.Runs on your machine, installed from PyPI.19 GitHub stars.
- MaBoSS Boolean Network Simulator @marcorusc/mabossMCP server for Boolean network simulation and attractor analysis using MaBoSS3% chance this is malicious. Assessed by AI, which can make mistakes.Runs on your machine, installed from PyPI.19 GitHub stars.
- viznoir @kimimgo/viznoirCinema-quality science visualization for AI agents — headless VTK via MCP.4% chance this is malicious. Assessed by AI, which can make mistakes.Runs on your machine, installed from PyPI.19 GitHub stars.
Scientific computing MCP servers
A server here theorem proving, symbolic maths, physics or engineering simulation.
Not here: business or finance calculators, trading backtests and simple arithmetic.
162 remote255 localTagged by Odel's AI, which can make mistakes
Most popular in Scientific computing
By GitHub stars, at most two per publisher- Number 1: ToolUniverse@mims-harvard/tooluniverse2,700+ scientific tools for AI scientists: life science, research, literature, and more.4% chance this is malicious. Assessed by AI, which can make mistakes.Runs on your machine, installed from PyPI.1,718 GitHub stars.
- Number 2: MATLAB MCP Server@matlab/matlab-mcp-serverConnect AI coding agents to MATLAB. Run code, tests, and analysis via MCP.3% chance this is malicious. Assessed by AI, which can make mistakes.Runs on your machine, installed from MCPB.1,645 GitHub stars.
- Number 3: Equation.io@equation/equationCreate interactive 2D and 3D graphs with validated equations, shareable links, and PNG previews.3% chance this is malicious. Assessed by AI, which can make mistakes.A remote server; no sign-in.408 GitHub stars.
