Biology & genomics MCP servers

A server here biology, genes, proteins or DNA analysis.

Not here: medicine for patients.

223servers
145 remote78 localTagged by Odel's AI, which can make mistakes

Best fit

198 made for this, ranked by starsRemoteLocal
  1. UniProt MCP @smaniches/uniprot-mcpVerifiable, release-aware protein evidence workflows over UniProt and linked scientific sources.3% chance this is malicious. Assessed by AI, which can make mistakes.Runs on your machine, installed from PyPI.3 GitHub stars.
  2. Elnora MCP Server @elnora-ai/elnora-mcp-serverAI-powered bioprotocol optimization — generate, search, and manage lab protocols via MCP7% chance this is malicious. Assessed by AI, which can make mistakes.A remote server; you sign in with your account.3 GitHub stars.
  3. Preprint Fulltext @genecell/preprint-fulltextbioRxiv/medRxiv/arXiv preprint full text as structured sections for AI agents + search.4% chance this is malicious. Assessed by AI, which can make mistakes.Runs on your machine, installed from PyPI.2 GitHub stars.
  4. PIASO @genecell/piaso-mcpPIASO single-cell ecosystem docs (PIASO, COSG, cytome, LARIS, cytorete) + live PIASOmarkerDB3% chance this is malicious. Assessed by AI, which can make mistakes.Runs on your machine, installed from PyPI.2 GitHub stars.
  5. Studydiff @nickjlamb/studydiffExplain why two scientific papers disagree, every claim grounded in a verbatim source quote.4% chance this is malicious. Assessed by AI, which can make mistakes.Runs on your machine, installed from npm.2 GitHub stars.
  6. Biolit @rachadele/biolitLLM-assisted biomedical literature screening and extraction for PubMed, GEO, and preprints.4% chance this is malicious. Assessed by AI, which can make mistakes.Runs on your machine, installed from PyPI.2 GitHub stars.
  7. GWAS Bioinformatics MCP Server @zaeyasa/gwas-mcpAccess 30+ bioinformatics tools from 14 databases.4% chance this is malicious. Assessed by AI, which can make mistakes.Runs on your machine, installed from PyPI.1 GitHub stars.
  8. Amass @amass/amassLinked life-science search: 43M+ papers, 1.2M+ trials, drugs, genes, FDA/EMA approvals, patents.7% chance this is malicious. Assessed by AI, which can make mistakes.A remote server; you sign in with your account.1 GitHub stars.
  9. Aurora Agent @murariambati/aurora-agentFIBER decision-context compiler with honest omission accounting: 259 evidence-bearing MCP tools.6% chance this is malicious. Assessed by AI, which can make mistakes.Runs on your machine, installed from MCPB.1 GitHub stars.
  10. Folklore Clinical Variant Interpretation MCP @helena-bioinformatics/folkloreBioinformatics MCP for genomic variant interpretation, gene-disease evidence and literature.3% chance this is malicious. Assessed by AI, which can make mistakes.A remote server; no sign-in.1 GitHub stars.
  11. Alphafold @pipeworx-io/alphafoldAlphaFold DB MCP — predicted protein structures.6% chance this is malicious. Assessed by AI, which can make mistakes.A remote server; no sign-in.1 GitHub stars.
  12. Emdb @pipeworx-io/emdbEMDB (EBI Electron Microscopy Data Bank) MCP — keyless.7% chance this is malicious. Assessed by AI, which can make mistakes.A remote server; no sign-in.1 GitHub stars.
  13. NobleBlocks paper search @nobleblocks/nobleblocks-mcpSearch 340M+ academic papers — citation graphs, semantic similarity, and AI literature reviews.4% chance this is malicious. Assessed by AI, which can make mistakes.A remote server; no sign-in.1 GitHub stars.
  14. BioAI 日知 @minsyang/bioai-rizhiRead-only AI biopharma news, research records, companies, and source status from BioAI 日知.4% chance this is malicious. Assessed by AI, which can make mistakes.A remote server; no sign-in.
  15. BioHarbor @danielluo2/bioharborRun real bioinformatics from your AI agent. Reliable, reproducible, on your own GPUs.3% chance this is malicious. Assessed by AI, which can make mistakes.Runs on your machine, installed from PyPI.
  16. Agentic Target Evidence @athril/agentic-target-evidenceRead-only biomedical evidence tools for drug-target validation: DepMap, gnomAD, OpenTargets, PubMed…3% chance this is malicious. Assessed by AI, which can make mistakes.Runs on your machine, installed from Docker.
  17. OpenReadout @openreadout/openreadoutRead raw lab-instrument files offline: metadata, previews, integrity checks, open-format export.Not assessed yet.Runs on your machine, installed from npm.
  18. Oliver's mTOR Atlas @open-mtor-atlas/mtor-atlasEvidence-labelled mTOR research: studies, entities, pathway claims, contradictions, open questions.Not assessed yet.A remote server; no sign-in.
  19. Dog Geroscience @w0lph/dog-geroscience-mcpDog-specific aging tools: HAGR dog rows, dog orthologs, dose translation, DAP codebooks, FDA FOI.Not assessed yet.Runs on your machine, installed from PyPI.
  20. AlphaFold @mrfentmen/alphafold-mcpKeyless MCP server for AlphaFold: protein structure predictions by UniProt accession, confidence...6% chance this is malicious. Assessed by AI, which can make mistakes.Runs on your machine, installed from npm.
  21. Pondlog Mushroom Observer @andrewschristison/pondlog-mushroomobserverMushroom Observer MCP server. Mycology observations, fungal taxonomy, and region discovery.2% chance this is malicious. Assessed by AI, which can make mistakes.Runs on your machine, installed from npm.
  22. GBIF @mrfentmen/gbif-mcpUse this MCP server to GBIF species taxonomy and biodiversity occurrence search. Tools include...4% chance this is malicious. Assessed by AI, which can make mistakes.Runs on your machine, installed from npm.
  23. HLA-Verify @hlaverify/hla-verifyHLA nomenclature and match checks against a pinned IPD-IMGT/HLA release. No patient identifiers.3% chance this is malicious. Assessed by AI, which can make mistakes.A remote server; no sign-in.
  24. Noodle Biomedical Literature Discovery MCP @helena-bioinformatics/noodleSearch biomedical papers, inspect publication records, and traverse citation or semantic graphs.3% chance this is malicious. Assessed by AI, which can make mistakes.A remote server; no sign-in.